Abstract Maize is considered one of the most important cereal fodder crops. Many studies on morphological diversity in fodder maize have been helpful in obtaining good heterotic hybrids. The current study focused on analysing diversity of 28 fodder maize inbreds with 30 SSR markers, which revealed total of 110 alleles; and their polymorphic information content (PIC) values ranged from 0.064 to 0.745. Population structure analysis revealed four subpopulation groups with the ΔK value of 132.70. Clustering based on the pairwise dissimilarity coefficient grouped the genotypes into two major and four sub-clusters. The high dissimilarity (0.777) observed between DM 84 and UMI 1221 indicated that these two were highly divergent. Principal coordinate analysis also showed diverse nature of inbreds and corroborated the clustering pattern. Parental diversity and their heterosis performance revealed that parents with average or narrow divergence could be useful in obtaining hybrids with medium/early flowering and moderate/high crude protein content. crops 2 3 markers 11 alleles PIC (PIC 0064 0 064 0.06 0745 745 0.745 13270 132 70 132.70 subclusters. subclusters sub clusters. clusters sub-clusters 0.777 0777 777 (0.777 8 122 divergent pattern mediumearly medium early moderatehigh moderate 1 006 06 0.0 074 74 0.74 1327 13 7 132.7 0.77 077 77 (0.77 12 00 0. 07 0.7 132. (0.7 (0. (0 (

Bulked segregant analysis was used to identify simple sequence repeat (SSR) markers associated with pod and kernel traits in cultivated peanut, to permit rapid selection of superior quality genotypes in the breeding program. SSR markers linked to pod and kernel traits were identified in two DNA pools (high and low), which were established using selected F2:6 recombinant individuals resulting from a cultivated cross between a runner (Tamrun OL01) and a Spanish (BSS 56) peanut. To identify quantitative trait loci (QTLs) for pod and kernel-related traits, parents were screened initially with 112 SSR primer pairs. The survey revealed 8.9% polymorphism between parents. Of ten SSR primer pairs distinguishing the parents, five (PM375, PM36, PM45, pPGPseq8D9, and Ah-041) were associated with differences between bulks for seed length, pod length, number of pods per plant, 100-seed weight, maturity, or oil content. Association was confirmed by analysis of segregation among 88 F2:6 individuals in the RIL population. Phenotypic means associated with markers for three traits differed by more than 40%, indicating the presence of QTLs with major effects for number of pods per plant, plant weight, and pod maturity. The SSR markers can be used for marker assisted selection for quality and yield improvement in peanut. To the best of our knowledge, this is the first report on the identification of SSR markers linked to pod - and kernel- related traits in cultivated peanut.