ABSTRACT Stock discrimination is essential for biomass population assessment and essential for the fisheries management. The analysis of shape differences in anatomical structures (e.g., body shape, otoliths, scales) has been relevant issue in the study of population structure. We evaluated the hypothesis on the existence of a stock-structured population of Pacific thread herring Opisthonema libertate in the northwestern coast of Mexico. Geometric morphometric methods were used to analyze body and otolith shape. Samples come from at three commercial fishery-landing sites: Magdalena Bay, Guaymas, and Mazatlan, Mexico. Results based on body and otolith shape support the existence of different morphotypes by location. Body shape allowed better discrimination than otolith shape. The differences observed between the phenotypic stocks suggest seasonal movements, which are linked to the marine current system in this region, particularly to the California Current and the North Equatorial Counter Current.

Analysis of wild phyllosoma of Panulirus inflatus (Bouvier, 1895) and P. gracilis Streets, 1871 determined the morphological structures having taxonomic value for differentiation of the two species, in addition to the structures described previously. Of 54 phyllosoma, species identity was confirmed by PCR-restriction fragment length polymorphism (RFLP) on 42 P. inflatus and 4 P. gracilis, for which morphology and morphometric measurements were taken. Morphological analysis found subexopodal spines, spines at the base of pereopods 1 and 2, and the mandibles are structures of taxonomic value for differentiating the two species. Morphometric data did not allow differentiation.