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au:SIQUEIRA, Walter Luiz

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Analysis of salivary parameters of mucopolysaccharidosis individuals
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NUNES, Patrícia Luciana Serra

; FONSECA, Filipe Atahide

; PARANHOS, Luiz Renato

; BLUMENBERG, Cauane

; BARÃO, Valentim Adelino Ricardo

; FERNANDES, Elizabeth Soares

; FERREIRA, Rebeca Garcia

; SIQUEIRA, Walter Luiz

; SIQUEIRA, Michelle Foigel

; MOFFA, Eduardo Buozi

Brazilian Oral Research

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2022, Volume 36 elocation e011

Abstract: En | Text: En | PDF: En

Abstract Mucopolysaccharidosis (MPS) is a heterogeneous group of rare, chronic, progressive and systemic inherited disorders resulting from deficiency or lack of lysosomal enzymes responsible for the degradation of glycosaminoglycans. Products of nitrosative stress have been previously detected in blood and urine samples of patients with MPS. However, it is unclear whether they are present in the saliva of MPS patients and also if they correlate with salivary parameters such as flow and pH. This study compared the salivary levels of NOX (NO2- + NO3-), nitrite (NO2-), protein (albumin), erythrocyte and leukocyte numbers, as well as the salivary flow rate and pH values of samples obtained from 10 MPS patients and 10 healthy subjects. MPS patients exhibited higher salivary levels of NOX and NO2- when compared to healthy subjects (p < 0.05). Albumin was only detected in six saliva samples of MPS patients and, erythrocytes and leukocytes were detected in 60% and 40% of the MPS patients, respectively. In addition, salivary flow rate and pH averages were statistically lower in this group when compared to healthy samples (p < 0.05). Overall, the data indicates that the salivary levels of NO products can be used in combination with other heath indicators to monitor MPS disorders.

https://doi.org/10.1590/1807-3107bor-2022.vol36.0011

RANK, RANKL, and OPG in Dentigerous Cyst, Odontogenic Keratocyst, and Ameloblastoma: A Meta-Analysis
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Lima, Igor Felipe Pereira

; Matos, Felipe Rodrigues de

; Bernardino, Ítalo de Macedo

; Santana, Ingrede Tatiane Serafim

; Vieira, Walbert de Andrade

; Blumenberg, Cauane

; Siqueira, Walter Luiz

; Paranhos, Luiz Renato

Brazilian Dental Journal

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feb 2021, Volume 32 N. 1 Pages 16 - 25

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

Resumo O objetivo deste estudo foi avaliar e comparar a imunoexpressão de RANK, RANKL e OPG em cisto dentígero, ceratocisto odontogênico e ameloblastoma. O protocolo foi registrado no PROSPERO (CRD [Oculto]). Sete bancos de dados (Embase, Lilacs, LIVIVO, PubMed, Scopus, SciELO e Web of Science) foram as principais fontes de pesquisa e duas bases de dados (Open Grey e Open Thesis) capturaram parcialmente a “literatura cinza”. Apenas estudos transversais foram incluídos. A ferramenta JBI avaliou o risco de viés. Uma metanálise com modelo de efeitos aleatórios estimou os valores da razão OPG e RANKL relatados pelos estudos individuais e seus respectivos intervalos de confiança de 95%. A heterogeneidade entre os estudos foi avaliada por meio do teste I2. Apenas nove estudos preencheram os critérios de inclusão e foram considerados nas análises. Os estudos foram publicados entre 2008 e 2018. Dois estudos apresentaram baixo risco de viés, enquanto sete estudos apresentaram risco moderado. A meta-análise mostrou a maior razão OPG> RANKL para cisto dentígero (ES=43,3%; IC95%=14,3-74,8) e ceratocisto odontogênico (ES=36,8%; IC95%=18,8-56,7). Por outro lado, a maior razão OPG <RANKL foi encontrada para ameloblastoma (ES=73,4%; IC95%=55,4-88,4) e foi maior na região estromal em comparação com a região epitelial odontogênica. Os resultados podem explicar o potencial agressivo do ameloblastoma devido a uma maior proporção OPG <RANKL nesse tumor, enquanto tal proporção foi menor no cisto dentígero e no ceratocisto odontogênico.

Abstract The aim of this study was to assess and compare RANK, RANKL, and OPG immunoexpression in dentigerous cyst, odontogenic keratocyst, and ameloblastoma. The protocol was registered in PROSPERO (CRD42018105543). Seven databases (Embase, Lilacs, LIVIVO, PubMed, Scopus, SciELO, and Web of Science) were the primary search sources and two databases (Open Grey and Open Thesis) partially captured the “grey literature”. Only cross sectional studies were included. The JBI Checklist assessed the risk of bias. A meta-analysis with random effects model estimated the values from the OPG and RANKL ratio reported by the individual studies and respective 95% confidence intervals. The heterogeneity among studies was assessed with I2 statistics. Only nine studies met the inclusion criteria and were considered in the analyses. The studies were published from 2008 to 2018. Two studies presented low risk of bias, while seven studies presented moderate risk. The meta-analysis showed the highest OPG>RANKL ratio for dentigerous cyst (ES=43.3%; 95% CI=14.3-74.8) and odontogenic keratocyst (ES=36.8%; 95% CI=18.8-56.7). In contrast, the highest OPG<RANKL ratio was found for ameloblastoma (ES=73.4%; 95% CI=55.4-88.4) and it was higher in the stromal region compared to the odontogenic epithelial region. The results may explain the aggressive potential of ameloblastoma from the higher OPG<RANKL ratio in this tumor, while it was lower for dentigerous cyst and odontogenic keratocyst.

https://doi.org/10.1590/0103-6440202103387 667 downloads

Saliva as a tool for monitoring hemodialysis: a systematic review and meta-analysis
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RODRIGUES, Renata Prata Cunha Bernardes

; VIEIRA, Walbert de Andrade

; SIQUEIRA, Walter Luiz

; AGOSTINI, Bernardo Antonio

; MOFFA, Eduardo Buozi

; PARANHOS, Luiz Renato

Brazilian Oral Research

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2021, Volume 35 elocation e016

Abstract: En | Text: En | PDF: En

Abstract This study aimed to assess whether the reductions in serum urea and creatinine levels are different from the reductions in salivary urea and creatinine levels that occur after hemodialysis in chronic renal patients. The systematic review protocol was registered in the PROSPERO database. Eight databases were searched to identify pretest-posttest studies of chronic kidney disease patients undergoing hemodialysis, with no language or year restrictions. The JBI Critical Appraisal Tool was used to assess the risk of bias. Meta-analyses using random-effect models were conducted to compare salivary and serum correlations and to pooled mean and proportion differences from pre- to posthemodialysis urea and creatinine levels by subgroup analysis. The I2 test was used to assess heterogeneity, and a meta-regression was performed to statistically assess correlations and differences in the pooled effects pre- and postdialysis. The Grading of Recommendation, Assessment, Development, and Evaluation (GRADE) was used to assess the certainty of evidence. The search resulted in 1404 records, and only six studies (n = 252 participants) fulfilled the eligibility criteria and were included. The studies were published between 2013 and 2018. All studies showed a significant reduction in both salivary and serum urea/creatinine levels. All eligible studies presented a low risk of bias. The meta-analysis shows a moderate to high correlation between salivary and blood levels of urea (r: 0.79; 95% CI: 0.56-1.00) and creatinine (r: 0.64; 95%CI: 0.16–1.00), with a very low level of certainty. The reductions in salivary urea and creatinine levels are similar to and correlated with the reductions in blood urea and creatine levels after hemodialysis among chronic kidney disease patients.

https://doi.org/10.1590/1807-3107bor-2021.vol35.0016 1010 downloads

Advances and challenges in the water sciences in Brazil: a community synthesis of the XXIII Brazilian Water Resources Symposium
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Paiva, Rodrigo Cauduro Dias de

; Chaffe, Pedro Luiz Borges

; Anache, Jamil Alexandre Ayach

; Fontes, Andrea Sousa

; Araujo, Ligia Maria Nascimento de

; Araujo, Anderson Nascimento de

; Bartiko, Daniel

; Bleninger, Tobias

; Amorim, Pablo Borges de

; Buarque, Diogo Costa

; Carlotto, Tomas

; Collischonn, Walter

; Detzel, Daniel Henrique Marco

; Fan, Fernando Mainardi

; Formiga-Johnsson, Rosa Maria

; Kobiyama, Masato

; Mannich, Michael

; Marques, Guilherme

; Michel, Gean Paulo

; Oliveira, Debora Yumi de

; Oliveira, Paulo Tarso Sanches de

; Pinheiro, Adilson

; Ruhoff, Anderson

; Siqueira, Vinicius Alencar

; Tassi, Rutineia

; Zanandrea, Franciele

RBRH

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2020, Volume 25 elocation e50

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

RESUMO Este artigo apresenta uma síntese das sessões especiais do XXIII Simpósio Brasileiro de Recursos Hídricos 2019, com o objetivo de compreender os principais avanços e desafios em recursos hídricos no Brasil. Foram analisados mais de 250 trabalhos e apresentações em 16 sessões especiais abrangendo temas como Variabilidade e Mudanças Climáticas, Desastres, Modelagem, Hidrologia de Grande Escala, Sensoriamento Remoto, Educação e Gestão de Recursos Hídricos. Esta avaliação destacou a diversidade única de atributos naturais e antrópicos dos recursos hídricos brasileiros, que oferece uma grande oportunidade para aprendizado sobre sistemas hidrológico e humano acoplados. A maioria das contribuições é relacionada a métodos e quantificação de fenômenos hídricos, existindo uma necessidade clara de incentivo a mais pesquisas em compreensão de fenômenos. Existe uma vasta rede de coautores, mas principalmente da academia e com certo grau de fragmentação regional. A comunidade da ABRhidro tem o desafio de aumentar a sua rede de colaboração, a cultura de análises de síntese, e construir uma agenda comum para a pesquisa em recursos hídricos. Também é o momento de alinhar esforços com a comunidade de recursos hídricos internacional, usando nossas experiências para contribuir ativamente na solução de questões relacionadas à água em nível global.

ABSTRACT In this paper we synthesize the special sessions of the XXIII Brazilian Water Resources Symposium 2019 in order to understand the major advances and challenges in the water sciences in Brazil. We analyzed more than 250 papers and presentations of 16 special sessions covering topics of Climate Variability and Change, Disasters, Modeling, Large Scale Hydrology, Remote Sensing, Education, and Water Resources Management. This exercise highlighted the unique diversity of natural and human water features in Brazil, that offers a great opportunity for understanding coupled hydrological and societal systems. Most contributions were related to methods and the quantification of water phenomena, therefore, there is a clear necessity for fostering more research on phenomena comprehension. There is a vast network of co-authorship among institutions but mostly from academia and with some degree of regional fragmentation. The ABRhidro community now has the challenge to enhance its collaboration network, the culture of synthesis analysis, and to build a common agenda for water resources research. It is also time for us to be aligned with the international water science community and to use our experiences to actively contribute to the tackling of global water issues.

https://doi.org/10.1590/2318-0331.252020200136 1129 downloads

Diagnostic potential of saliva proteome analysis: a review and guide to clinical practice
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Esteves, Camilla Vieira

; Campos, Wladimir Gushiken de

; Souza, Milena Monteiro de

; Lourenço, Silvia Vanessa

; Siqueira, Walter Luiz

; Lemos-Júnior, Celso Augusto

Brazilian Oral Research

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2019, Volume 33 elocation e043

Abstract: En | Text: En | PDF: En

Abstract: Proteomic techniques have become popular in medicine and dentistry because of their widespread use in analyzing bodily fluids such as blood, saliva, urine, and gingival crevicular fluids as well as hard tissues such as enamel, dentine, and cementum. This review is a guide to proteomic techniques in general dentistry, summarizing techniques and their clinical application in understanding and diagnosing diseases and their use in identifying biomarkers of various diseases.

https://doi.org/10.1590/1807-3107bor-2019.vol33.0043 3241 downloads

Zika virus infection spread through saliva – a truth or myth?
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SIQUEIRA, Walter Luiz

; MOFFA, Eduardo Buozi

; MUSSI, Maria Carolina Martins

; MACHADO, Maria Aparecida de Andrade Moreira

Brazilian Oral Research

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2016, Volume 30 N. 1 elocation e46

Abstract: En | Text: En | PDF: En

Abstract In this Point-of-view article we highlighted some features related to saliva and virus infection, in special for zika virus. In addition, we pointed out the potential oral problems caused by a microcephaly originated by a zika virus infection. In the end the, we demonstrated the importance of a more comprehensive exploration of saliva and their components as a fluid for diagnostic and therapeutic approaches on oral and systemic diseases.

https://doi.org/10.1590/1807-3107BOR-2016.vol30.0046 6607 downloads

Heterogeneity of linalool chemotypes of Lippia alba (Mill.) N.E.Br., based on clonal half-sib progenies
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Bottignon, Marcos Ribeiro

; Rufino, Elcio Rodrigo

; Marques, Márcia Ortiz Mayo

; Colombo, Carlos Augusto

; Azevedo Filho, Joaquim Adelino de

; Lourenção, André Luiz

; Martins, Antônio Lúcio Mello

; Siqueira, Walter José

Scientia Agricola

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aug 2011, Volume 68 N. 4 Pages 447 - 453

Abstract: En | Text: En | PDF: En

Lippia alba (Mill.) N.E.Br. is an aromatic and medicinal shrub native to the American continent. Despite its potential as a source of essential oil for the pharmaceutical and cosmetics industries, few selection and genetic improvement studies have been carried out. The aim of this study was to provide genetic information on this species for breeding programs, showing its selection potential, by investigating clonal half-sib progenies. The following characteristics were evaluated per plant: leaf dry mass (LDM), total dry mass (TDM), leaf yield (LY), essential oil yield (EOY) and oil production (OP). Estimates were made for the several genetic parameters including absolute genetic gain at 30% selection intensity, correlations and relative contribution of additive and environmental effects to phenotypic correlation. Two experimental trials on 30 progenies were conducted: one in Campinas, state of São Paulo (SP), Brazil, with two harvests of the aerial part, and one in Monte Alegre do Sul, SP, Brazil, with only one harvest. The trials were conducted in a randomized block design consisting of subplots with three replications, each plot (progeny) consisting of 8 to 15 clonally-replicated plants with subplot harvesting. Variations were detected between progenies and harvests, as well as progeny/harvest interactions in the split plot experiment. High heritability and genetic gains were obtained at both sites for LDM, TDM and OP. The lowest variations among progenies were obtained for LY and EOY, highlighting selection problems. Negative additive genetic correlations were obtained for EOY × LDM, EOY × TDM, LY × TDM and LY × LDM. Selection for LDM resulted in increased oil production per plant (OP), even where there was a negative correlation between LDM × EOY.

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Characterization of aqueous silver nitrate solutions for leakage tests
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Costa, José Ferreira

; Siqueira, Walter Luiz

; Loguercio, Alessandro Dourado

; Reis, Alessandra

; Oliveira, Elizabeth de

; Alves, Cláudia Maria Coelho

; Bauer, José Roberto de Oliveira

; Grande, Rosa Helena Miranda

Journal of Applied Oral Science

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jun 2011, Volume 19 N. 3 Pages 254 - 259

Abstract: En | Text: En | PDF: En

OBJECTIVE: To determine the pH over a period of 168 h and the ionic silver content in various concentrations and post-preparation times of aqueous silver nitrate solutions. Also, the possible effects of these factors on microleakage test in adhesive/resin restorations in primary and permanent teeth were evaluated. MATERIAL AND METHODS: A digital pHmeter was used for measuring the pH of the solutions prepared with three types of water (purified, deionized or distilled) and three brands of silver nitrate salt (Merck, Synth or Cennabras) at 0, 1, 2, 24, 48, 72, 96 and 168 h after preparation, and storage in transparent or dark bottles. Ionic silver was assayed according to the post-preparation times (2, 24, 48, 72, 96, 168 h) and concentrations (1, 5, 25, 50%) of solutions by atomic emission spectrometry. For each sample of each condition, three readings were obtained for calculating the mean value. Class V cavities were prepared with enamel margins on primary and permanent teeth and restored with the adhesive systems OptiBond FL or OptiBond SOLO Plus SE and the composite resin Filtek Z-250. After nail polish coverage, the permanent teeth were immersed in 25% or 50% AgNO3 solution and the primary teeth in 5% or 50% AgNO3 solutions for microleakage evaluation. ANOVA and the Tukey's test were used for data analyses (α=5%). RESULTS: The mean pH of the solutions ranged from neutral to alkaline (7.9±2.2 to 11.8±0.9). Mean ionic silver content differed depending on the concentration of the solution (4.75±0.5 to 293±15.3 ppm). In the microleakage test, significant difference was only observed for the adhesive system factor (p=0.000). CONCLUSIONS: Under the tested experimental conditions and based on the obtained results, it may be concluded that the aqueous AgNO3 solutions: have neutral/alkaline pH and service life of up to 168 h; the level of ionic silver is proportional to the concentration of the solution; even at 5% concentration, the solutions were capable of indicating loss of marginal seal in the composite restorations; the 3-step conventional adhesive system had better performance regarding microleakage in enamel on primary and permanent teeth.

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Estimativas de parâmetros genéticos de caracteres relacionados ao vigor de estacas em Lippia alba
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Rufino, Elcio Rodrigo

; Siqueira, Walter José

; Marques, Márcia Ortiz Mayo

; Colombo, Carlos Augusto

; Chiorato, Alisson Fernando

; Azevedo Filho, Joaquim Adelino

; Lourenção, André Luiz

; Yamamoto, Paula Yuri

; Martins, Antônio Lúcio Mello

Bragantia

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dec 2010, Volume 69 N. 4 Pages 779 - 786

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

A espécie Lippia alba da família Verbenaceae, aromática e medicinal, é um arbusto nativo com muito vigor e variabilidade genética. O principal interesse dos estudos com esta espécie são os óleos essenciais, cujas funções têm sido comprovadas cientificamente para aplicações nas indústrias de fármacos, cosmética, perfumaria e alimentícia. Apesar desta importância potencial, inexistem pesquisas sobre estimativas de parâmetros genéticos nesta espécie como forma de subsidiar o melhoramento que até o presente momento é incipiente. Este trabalho teve como objetivo, avaliar o potencial genético de Lippia alba, estimando parâmetros genéticos inicialmente em caracteres obtidos em nível de estacas, uma vez que é a forma tradicional de multiplicação da espécie. Os caracteres avaliados foram: sobrevivência (S%), comprimento de brotos (Cb) e massa de brotos (Mb). Nesses estudos iniciais de parâmetros genéticos, envolvendo vigor de estacas, formaram-se três grupos de progênies com tamanhos efetivos de 30, 23 e 7. Excetuando-se S%, obtiveram-se altas herdabilidades, no sentido restrito, para os três tamanhos efetivos, variando de 90,2% a 94,5% para Mb e 95,2 %a 97,1% para Cb. Para S%, os valores de herdabilidade foram moderados, entre 50,0% e 56,0%. Os ganhos genéticos foram semelhantes também nos três grupos de progênies formados, refletindo ampla variabilidade genética mesmo para o grupo de reduzido tamanho efetivo de progênies. As correlações genéticas aditivas foram elevadas (87,9% a 99,9%), com predomínio nas correlações fenotípicas (G% entre 94,1% a 98,8%). Apesar das correlações elevadas de ambiente a proporção destes efeitos ambientais na correlação fenotípica foi baixa (E% entre 1,2% a 5,9%).

The species Lippia alba, belonging to the Verbenaceae family, is a vigorous wild bush with aromatic and medicinal properties. Due to the presence of several essential oils, it is used among others, mostly in drugs and cosmetics, perfumes. The species is poorly studied and no genetic parameter is known to help breeding programs. The main purpose of this research was to evaluate survival (S%), branches length (BL) and fresh weight (FW), in three progenies. High heritabilities, (FM 90.2% - 94.5%; BL 95.2% - 97.1%), in the narrow sense, were observed in all progeny groups, except for S% (50.0% - 56.0%). Genetic gains were similar for all three traits, strongly suggesting the presence of large genetic variability. Additive genetic correlations were high (87.9% - 98.8%) and predominate in the phenotypic correlations (G% - 94.1% - 98.8%). Despite the high environmental correlations, their effects on the phenotypic correlations were quite small (E% 1.2 % - 5.9%).

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Performance of ginger grass (Lippia alba) for traits related to the production of essential oil
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Yamamoto, Paula Yuri

; Colombo, Carlos Augusto

; Azevedo Filho, Joaquim Adelino

; Lourenção, André Luiz

; Marques, Márcia Ortiz Mayo

; Morais, Guilherme Domingues da Silva

; Chiorato, Alisson Fernando

; Martins, Antônio Lúcio Mello

; Siqueira, Walter José

Scientia Agricola

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2008, Volume 65 N. 5 Pages 481 - 489

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

A Lippia alba (Verbenaceae) é um arbusto produtor de óleo essencial com importantes atividades biológicas, farmacológicas e aromatizantes. Visando o cultivo sustentado de uma nova espécie com potencial econômico, os objetivos deste trabalho foram avaliar o desempenho da L. alba para massa de folha fresca (MF), massa de folha seca (MS), sintomas de vírus (SV - Cucumber mosaic virus, CMV), rendimento de óleo essencial (RE) e composição química do óleo (CQ), e avaliar a estabilidade e adaptabilidade fenotípica para o caráter MS. Dez genótipos pertencentes a quatro grupos químicos foram testados em seis experimentos instalados no estado de São Paulo, Brasil, com delineamento em blocos ao acaso e duas plantas por parcela. Em Monte Alegre do Sul e Pindorama, foi utilizado espaçamento de 2,0 x 0,4 x 1,6 m e em Campinas, foram instalados quatro experimentos 1,0 x 0,4 x 0,6 m sob condições distintas de adubação e irrigação. O efeito de genótipo foi significativo para todas as características avaliadas, revelando elevada produtividade de folhas do IAC-16 (citral), RE Yamamoto et al. superior dos quimiotipos linalol e limoneno/carvona e susceptibilidade deste último ao CMV. As oscilações no desempenho dos genótipos nos diferentes experimentos foram de baixa magnitude para os caracteres fitoquímicos (RE e CQ) e nenhuma variação qualitativa foi observada para CQ. Os genótipos IAC-2 (linalol) e IAC-13 (limoneno/carvona) apresentaram-se estáveis para MS e com ampla adaptabilidade, e são recomendados para o início do cultivo da espécie. A presente pesquisa fornece subsídios também para o início de programas de melhoramento genético em L. alba.

Lippia alba (Verbenaceae) is a shrub whose essential oil has important biological, pharmacological, and aromatizing properties. To reach the sustained cultivation of new species with economic potential, the present study aimed to evaluate L. alba performance for fresh leaf matter (FM), leaf dry matter (DM), virus symptoms (VS - Cucumber mosaic virus, CMV), oil yield (OY), and oil chemical composition (OC), and to evaluate DM stability and adaptability. Ten genotypes of four chemical groups (chemotypes) were evaluated in six experiments designed as randomized blocks with two plants per plot, over the whole State of São Paulo, Brazil. A 2.0 x 0.4 x 1.6 m spacing was used in Monte Alegre do Sul and Pindorama, while a 1.0 x 0.4 x 0.6 m spacing was used in Campinas, where four experiments were established under different irrigation and fertilization conditions. The genotype effect was significant (p < 0.05) for all traits evaluated, with high leaf productivity of IAC-16 (citral chemotype), best OY means in the linalool and limonene/carvone chemotypes, and susceptibility of the latter chemotype to CMV. The genotype performance oscillations in the six environments were significant for FM and DM, and despite their significance for phytochemical traits (OY and OC), they were of low magnitude. No qualitative variation was detected for OC. The IAC-2 (linalool) and IAC-13 (limonene/carvone) genotypes showed high stability and wide adaptability, and are recommended to establish initial cultivations of this species. This research also indicated genetic sources to start Lippia alba genetic breeding programs.

3491 downloads Cited 2 times in SciELO

11.

Brazilian coffee genome project: an EST-based genomic resource
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Vieira, Luiz Gonzaga Esteves

; Andrade, Alan Carvalho

; Colombo, Carlos Augusto

; Moraes, Ana Heloneida de Araújo

; Metha, Ângela

; Oliveira, Angélica Carvalho de

; Labate, Carlos Alberto

; Marino, Celso Luis

; Monteiro-Vitorello, Claúdia de Barros

; Monte, Damares de Castro

; Giglioti, Éder

; Kimura, Edna Teruko

; Romano, Eduardo

; Kuramae, Eiko Eurya

; Lemos, Eliana Gertrudes Macedo

; Almeida, Elionor Rita Pereira de

; Jorge, Érika C.

; Albuquerque, Érika V. S.

; Silva, Felipe Rodrigues da

; Vinecky, Felipe

; Sawazaki, Haiko Enok

; Dorry, Hamza Fahmi A.

; Carrer, Helaine

; Abreu, Ilka Nacif

; Batista, João A. N.

; Teixeira, João Batista

; Kitajima, João Paulo

; Xavier, Karem Guimarães

; Lima, Liziane Maria de

; Camargo, Luis Eduardo Aranha de

; Pereira, Luiz Filipe Protasio

; Coutinho, Luiz Lehmann

; Lemos, Manoel Victor Franco

; Romano, Marcelo Ribeiro

; Machado, Marcos Antonio

; Costa, Marcos Mota do Carmo

; Sá, Maria Fátima Grossi de

; Goldman, Maria Helena S.

; Ferro, Maria Inês T.

; Tinoco, Maria Laine Penha

; Oliveira, Mariana C.

; Van Sluys, Marie-Anne

; Shimizu, Milton Massao

; Maluf, Mirian Perez

; Eira, Mirian Therezinha Souza da

; Guerreiro Filho, Oliveiro

; Arruda, Paulo

; Mazzafera, Paulo

; Mariani, Pilar Drummond Sampaio Correa

; Oliveira, Regina L.B.C. de

; Harakava, Ricardo

; Balbao, Silvia Filippi

; Tsai, Siu Mui

; Mauro, Sonia Marli Zingaretti di

; Santos, Suzana Neiva

; Siqueira, Walter José

; Costa, Gustavo Gilson Lacerda

; Formighieri, Eduardo Fernandes

; Carazzolle, Marcelo Falsarella

; Pereira, Gonçalo Amarante Guimarães

Brazilian Journal of Plant Physiology

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mar 2006, Volume 18 N. 1 Pages 95 - 108

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

O café é um dos principais produtos agrícolas, sendo considerado o segundo item em importância do comércio internacional de "commodities". O gênero Coffea pertence à família Rubiaceae que também inclui outras plantas importantes. Este gênero contém aproximadamente 100 espécies, mas a produção comercial é baseada somente em duas espécies, Coffea arabica e Coffea canephora, que representam aproximadamente 70 % e 30 % do mercado total de café, respectivamente. O Projeto Genoma Café Brasileiro foi desenvolvido com o objetivo de disponibilizar os modernos recursos da genômica à comunidade científica e aos diferentes segmentos da cadeia produtiva do café. Para isso, foram seqüenciados 214.964 clones escolhidos aleatoriamente de 37 bibliotecas de cDNA de C. arabica, C. canephora e C. racemosa representando estádios específicos do desenvolvimento de células e de tecidos do cafeeiro, resultando em 130.792, 12.381 e 10.566 seqüências de cada espécie, respectivamente, após processo de trimagem. Os ESTs foram agrupados em 17.982 contigs e em 32.155 singletons. A comparação destas seqüências pelo programa BLAST revelou que 22 % não tiveram nenhuma similaridade significativa às seqüências no banco de dados do National Center for Biotechnology Information (de função conhecida ou desconhecida). A base de dados de ESTs do cafeeiro resultou na identificação de cerca de 33.000 unigenes diferentes. Os resultados de anotação das seqüências foram armazenados em base de dados "online" em <A HREF="http://www.lge.ibi.unicamp.br/cafe">http://www.lge.ibi.unicamp.br/cafe</A>. Os recursos desenvolvidos por este projeto disponibilizam ferramentas genéticas e genômicas que podem ser decisivas para a sustentabilidade, a competitividade e a futura viabilidade da agroindústria cafeeira nos mercados interno e externo.

Coffee is one of the most valuable agricultural commodities and ranks second on international trade exchanges. The genus Coffea belongs to the Rubiaceae family which includes other important plants. The genus contains about 100 species but commercial production is based only on two species, Coffea arabica and Coffea canephora that represent about 70 % and 30 % of the total coffee market, respectively. The Brazilian Coffee Genome Project was designed with the objective of making modern genomics resources available to the coffee scientific community, working on different aspects of the coffee production chain. We have single-pass sequenced a total of 214,964 randomly picked clones from 37 cDNA libraries of C. arabica, C. canephora and C. racemosa, representing specific stages of cells and plant development that after trimming resulted in 130,792, 12,381 and 10,566 sequences for each species, respectively. The ESTs clustered into 17,982 clusters and 32,155 singletons. Blast analysis of these sequences revealed that 22 % had no significant matches to sequences in the National Center for Biotechnology Information database (of known or unknown function). The generated coffee EST database resulted in the identification of close to 33,000 different unigenes. Annotated sequencing results have been stored in an online database at <A HREF="http://www.lge.ibi.unicamp.br/cafe">http://www.lge.ibi.unicamp.br/cafe</A>. Resources developed in this project provide genetic and genomic tools that may hold the key to the sustainability, competitiveness and future viability of the coffee industry in local and international markets.

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12.

Neisseria gonorrhoeae: resistência cromossômica à tetraciclina em São Paulo, Brasil
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Belda Junior, Walter

; Fagundes, Luiz Jorge

; Siqueira, Luis Fernando de Góes

Anais Brasileiros de Dermatologia

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feb 2005, Volume 80 N. 1 Pages 37 - 40

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

FUNDAMENTO: A utilização de antimicrobianos no tratamento da gonorréia iniciou-se em 1930 com as sulfonamidas. No decorrer dos anos outras drogas passaram a ser utilizadas, entre elas a tetraciclina. Embora eficaz no início, esta droga, ao longo do tempo, passou a não mais apresentar o resultado terapêutico esperado em virtude do aparecimento de quadros de resistência cromossômica e plasmidial em diversos países. Como a tetraciclina ainda continua sendo indicada, isoladamente ou associada a outras drogas antimicrobianas, para o tratamento da gonorréia no Brasil, tornou-se necessária a realização de um estudo de sensibilidade do gonococo à mesma, no intuito de se estimar a real dimensão da resistência do gonococo à tetraciclina. OBJETIVO: Avaliar a incidência de resistência cromossômica das cepas de Neisseria gonorrhoeae à tetraciclina. MÉTODO: Estudo da concentração inibitória mínima pelo método de diluição em ágar. RESULTADOS: A resistência cromossômica à tetraciclina detectada foi de 40,3% entre todas as cepas estudadas, segundo os critérios estabelecidos pelo Center for Diseases Control. CONCLUSÕES: Desaconselha-se definitivamente o uso isolado ou associado da tetraciclina e derivados, no tratamento da gonorréia no Brasil, no atual momento epidemiológico.

BACKGROUND: The use of antimicrobials in the treatment of gonorrhoea started in 1930 with sulphonamides. Subsequently other drugs, such as tetracycline and its derivatives, were indicated for treating gonorrhoea. Therapeutic response to these drugs has tended to decline due to chromossomal and plasmidic resistance. However, tetracycline as a monotherapy or in association with other drugs is still prescribed for treating gonorrhea in Brazil. This justifies the need for a critical analysis in order to evaluate the sensitivity of gonococcus to this drug. OBJETIVE: Evaluate the real incidence of chromosomal resistance of Neisseria gonorrhoeae strains to tetracycline in our environment. METHOD: Analysis of the minimal inhibitory concentration in agar dilution. RESULTS: The chromosomal resistance to tetracycline was detected in 40.3% of all analyzed strains. CONCLUSIONS: This finding condemns the use of tetracycline as a mono or combined therapy for the treatment of gonorrhoea in our environment.

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13.

Avaliação da resistência de acessos de tomateiro a tospovírus e a geminivírus
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Lourenção, André Luiz

; Melo, Arlete M. T. de

; Siqueira, Walter José

; Colariccio, Addolorata

; Melo, Paulo César T. de

Horticultura Brasileira

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jun 2004, Volume 22 N. 2 Pages 193 - 196

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

Treze linhagens avançadas e três cultivares de tomateiro foram avaliadas em condições de campo para resistência a tospovírus e a geminivírus, em Campinas (SP). O germoplasma avaliado compreendeu linhagens do grupo IAC e as cultivares Stevens, Franco e IPA-5. Um mesmo experimento foi instalado em duas épocas. Na primeira, o experimento foi conduzido de 12/2001 a 2/2002, e a única espécie de tospovírus incidente foi Tomato chlorotic spot virus (TCSV). Na segunda época, de 7 a 9/2002, houve infecção por Tomato yellow vein streak virus (TYVSV), sendo a avaliação realizada mediante determinação da porcentagem de plantas infectadas e pela intensidade dos sintomas, medida por escala de notas. Não houve discriminação dos tratamentos com base no primeiro critério, mas o uso de notas permitiu a diferenciação do germoplasma, com destaque para a linhagem IAC-S3-16. Considerando-se ambas as épocas, confirmou-se a suscetibilidade de 'IPA-5' aos dois patógenos e demonstrou-se o comportamento de resistência de 'Franco' a TCSV e a TYVSV. Ainda deve ser destacado o desempenho das linhagens IAC-S3-54, IAC-S3-318, IAC-S4-39 e IAC-SVS-1, com baixas porcentagens de infecção por TCSV, e notas de sintomas de TYVSV próximas à média de 'Franco', caracterizando-se como promissoras para obtenção de cultivares com resistência aos dois vírus.

Thirteen lines and three commercial tomato cultivars were screened for tospovirus and geminivirus resistance under field conditions, in Campinas, São Paulo State, Brazil. The germplasm comprised advanced IAC lines plus cultivars Stevens, Franco and IPA-5. The same experiment was carried out in two planting seasons. In the first (December 2001 to February 2002), only Tomato chlorotic spot virus (TCSV) occurred in the field. In the second (July to September 2002), Tomato yellow vein streak virus (TYVSV) was identified in the experimental area, and the evaluation was carried out through counting of infected plants and by symptom intensity scoring by notes. There were no treatment differences by using the first criterion, but the score evaluation was effective in detecting differences among genotypes; line IAC-S3-16 showed an outstanding performance. Considering the two trials, the susceptibility of 'IPA-5' to both pathogens was confirmed; in addition, resistance of 'Franco' to TCSV and TYVSV was observed. Lines IAC-S3-54, IAC-S3-318, IAC-S4-39 and IAC-SVS-1 could be distinguished for the low infection by TCSV. So, these lines can be considered as promising genetic material to obtain cultivars with resistance to both viruses and good agronomic traits.

2411 downloads Cited 4 times in SciELO

14.

Growth of citrus rootstocks under aluminium stress in hydroponics
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Pereira, Walter Esfrain

; Siqueira, Dalmo Lopes de

; Puiatti, Mario

; Martínez, Carlos Alberto

; Salomão, Luiz Carlos Chamhum

; Cecon, Paulo Roberto

Scientia Agricola

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feb 2003, Volume 60 N. 1 Pages 31 - 41

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

As plantas apresentam diferentes graus de tolerância aos efeitos tóxicos do alumínio (Al), e a exploração dessa característica pode ser uma opção viável para a utilização dos solos ácidos. Este experimento teve como objetivo avaliar os efeitos de cinco concentrações de alumínio (0, 50, 100, 200 e 400 mimol L-1 de Al) sobre o crescimento dos porta-enxertos limoeiros 'Cravo' (Citrus limonia Osbeck) e 'Volkameriano' (Citrus volkameriana Hort. ex Tan.), e tangerineiras 'Cleópatra' (Citrus reshni Hort. ex Tan) e 'Sunki' (Citrus sunki Hort. ex Tan.) em cultivo hidropônico. Os tratamentos foram distribuídos no delineamento de blocos casualizados, com quatro repetições e duas plantas por parcela. Em todos os porta-enxertos, a taxa relativa de crescimento da matéria fresca total da planta aumentou na presença de baixas concentrações de Al e decresceu na presença de maiores concentrações. O crescimento da parte aérea, a relação de área foliar e a relação de massa foliar diminuíram em todos os porta-enxertos na presença do Al. No limoeiro 'Cravo' verificou-se decréscimo de crescimento do sistema radicular a partir de 23 mimol L-1 de Al. Nos demais porta-enxertos, esse crescimento atingiu valores máximos na presença de 91 a 117 mimol L-1 de Al, respctivamente. Considerando-se todas as características avaliadas do crescimento de planta, o limoeiro 'Cravo' foi o porta-enxerto mais sensível ao Al.

Plants present different degrees of adaptation to aluminium (Al) concentrations in the soil, and the understanding of this characteristic can lead to a viable option for the utilization of acid soils. The objective of this experiment was to evaluate the effects of five Al concentrations (0, 50, 100, 200, and 400 mumol L-1) on the growth of 'Rangpur' lime (Citrus limonia Osbeck) and 'Volkamer' lemon (Citrus volkameriana Hort. ex Tan.), and tangerine rootstocks 'Cleópatra' (Citrus reshni Hort. ex Tan) and 'Sunki' (Citrus sunki Hort. ex Tan.), in hydroponic culture. The treatments were arranged in a randomized block design, with four replications. For all rootstocks, the relative growth rate in terms of plant total fresh matter increased under low and, decreased under large Al concentrations. Growth of the shoot, leaf area ratio and leaf weight ratio decreased for all rootstocks in the presence of Al. The 'Rangpur' lime had a decrease of the root system growth, starting from 23 mumol L-1 of Al. For the remaining rootstocks, this growth reached maximum values at 91 to 117 mumol L-1 of Al, respectively. Considering all the evaluated characteristics of plant growth, the 'Rangpur' lime was the most susceptible to Al.

3458 downloads Cited 6 times in SciELO

15.

Atividade in vitro de cinco drogas antimicrobianas contra Neisseria gonorrhoeae
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Belda Júnior, Walter

; Siqueira, Luiz Fernando de Góes

; Nico, Marcelo Menta S

; Fagundes, Luiz Jorge

Anais Brasileiros de Dermatologia

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dec 2002, Volume 77 N. 6 Pages 661 - 667

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

FUNDAMENTOS: A utilização de antimicrobianos no tratamento da gonorréia iniciou-se em 1930 com a utilização das sulfonamidas. No decorrer dos anos outras drogas passaram a ser utilizadas em seu tratamento, como a penicilina, a espectinomicina, as tetraciclinas e outras. Embora altamente eficazes no início, essas drogas, ao longo do tempo, passaram a não mais apresentar o resultado terapêutico esperado em virtude do aparecimento de quadros de resistência cromossômica e plasmidial. Assim sendo, para se estabelecer um programa de combate e controle de determinada morbidade bacteriana, é necessária a realização de um programa de vigilância epidemiológica estadiando o comportamento de sensibilidade dos agentes etiológicos aos diferentes agentes terapêuticos. OBJETIVOS E MÉTODOS: Este trabalho teve por objetivo avaliar a sensibilidade das cepas de Neisseria gonorrhoeae às cinco drogas mais utilizadas no tratamento da gonorréia no Brasil (penicilina; cefoxitina; tetraciclina; tianfenicol e espectinomicina), através da concentração inibitória mínima. RESULTADOS E CONCLUSÃO: Concluímos que drogas como a cefoxitina, o tianfenicol e a espectinomicina ainda constituem excelentes fármacos para o tratamento da gonorréia. A penicilina, embora ainda eficaz, enseja maiores cuidados na sua utilização, frente ao surgimento de cepas resistentes, e a tetraciclina deve ser sobremaneira contra-indicada no tratamento da gonorréia.

BACKGROUND: The use of antimicrobial drugs in the treatment of gonorrhea began in 1930 with the use of sulfonamides. Through the years, other drugs such as penicillin, spectinomycin, tetracycline among others, came into use. Although highly efficient at first, with the passing of time these drugs began to present untoward therapeutic results, because of the appearance of cases with chromosomic and plasmidial resistance. Because of this, in order to establish a program to combat and control a determined bacterial morbidity, it was necessary to carry out a program of epidemiologic surveillance evaluating the sensitivity behavior of the etiologic agents against the various therapeutic agents. OBJECTIVES AND METHODS: The objective of this work was to evaluate the susceptibility of strains of Neisseria gonorrhoeae to the five drugs which are mostly used for the treatment of gonorrhea in Brazil (pencillin; cefoxitine; tetracycline; thiamphenicol and spectinomycine), by Minimum Inhibitory Concentration. RESULTS AND CONCLUSION: We concluded that drugs such as cefoxitine, thiamphenicol and spectinomycine are still excellent drugs for the treatment of gonorrhea. Although penicillin continues to be effective, its use requires greater care, due to the emergence of resistant strains, and tetracycline must be absolutely avoided for the treatment of gonorrhea.

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