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Current data shows that the autonomic and vascular systems can influence each other. However, only a few studies have addressed this association in the general population. We aimed to investigate whether heart rate variability (HRV) was associated with coronary artery calcium (CAC) in a cross-sectional analysis of the Brazilian Longitudinal Study of Adult Health (ELSA-Brasil). We examined baseline data from 3138 participants (aged 35 to 74 years) without previous cardiovascular disease who underwent CAC score assessment and had validated HRV recordings. Prevalent CAC was defined as a CAC score>0, and HRV analyses were performed over 5-min segments. We detected CAC score>0 in 765 (24.4%) participants. Subgroup analyses in older participants (≥49 years) adjusted for sociodemographic and clinical variables revealed that CAC score>0 was associated with lower values of standard deviation of NN intervals (SDNN) (odds ratio [OR]=1.32; 95%CI: 1.05,1.65), root mean square of successive differences between adjacent NN intervals (RMSSD) (OR=1.28; 95%CI: 1.02,1.61), and low frequency (LF) (OR=1.53, 95%CI: 1.21,1.92). Interaction analysis between HRV indices and sex in age-stratified groups revealed significant effect modification: women showed increased OR for prevalent CAC in the younger group, while for men, the associations were in the older group. In conclusion, participants aged ≥49 years with low SDNN, RMSSD, and LF values were more likely to present prevalent CAC, suggesting a complex interaction between these markers in the pathogenesis of atherosclerosis. Furthermore, our results suggested that the relationship between CAC and HRV might be sex- and age-related. other However population (HRV (CAC crosssectional cross sectional ELSABrasil. ELSABrasil ELSA Brasil . (ELSA-Brasil) 313 3 7 recordings score0 0 5min min 5 segments score> 76 24.4% 244 24 4 (24.4% 49 (≥4 SDNN (SDNN odds OR=1.32 OR132 =1.32 1 32 [OR]=1.32 95%CI 95CI CI 95 1.05,1.65, 105165 1.05,1.65 , 05 65 1.05,1.65) RMSSD (RMSSD OR=1.28 OR128 28 (OR=1.28 1.02,1.61, 102161 1.02,1.61 02 61 1.02,1.61) (LF OR=1.53, OR153 53 (OR=1.53 1.21,1.92. 121192 1.21,1.92 21 92 1.21,1.92) agestratified age stratified modification group men conclusion ≥4 atherosclerosis Furthermore agerelated. agerelated related. related age-related (ELSA-Brasil 31 24.4 2 (24.4 (≥ OR=1.3 OR13 132 =1.3 [OR]=1.3 9 10516 1.05,1.6 6 OR=1.2 OR12 (OR=1.2 10216 1.02,1.6 OR=1.53 OR15 (OR=1.5 12119 1.21,1.9 ≥ 24. (24. ( OR=1. OR1 13 =1. [OR]=1. 1051 1.05,1. (OR=1. 1021 1.02,1. OR=1.5 1211 1.21,1. (24 OR=1 =1 [OR]=1 105 1.05,1 (OR=1 102 1.02,1 121 1.21,1 (2 OR= = [OR]= 10 1.05, (OR= 1.02, 12 1.21, [OR] 1.05 (OR 1.02 1.21 [OR 1.0 1.2 1.