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Accessing the sand fly diversity of Tocantins, Northern Brazil: species delimitation using COI DNA barcoding Tocantins Brazil
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Soares, Ocléia de Sousa Rodrigues

; Rodrigues, Bruno Leite

; Shimabukuro, Paloma Helena Fernandes

Biota Neotropica

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2024, Volume 24 N. 4 elocation e20241680

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

Resumo Os flebotomíneos (Diptera, Psychodidae, Phlebotominae) são considerados vetores biológicos de agentes infecciosos como vírus, bactérias e protozoários. São reconhecidas cerca de 1.060 espécies, das quais 73 foram registradas no estado do Tocantins, localizado na transição dos biomas Amazônia e Cerrado, Norte do Brasil. Neste estudo, foi realizado o levantamento da fauna de flebotomíneos em diferentes ambientes do município de Palmas, incluindo cavernas. Além disso, avaliamos um fragmento do gene citocromo c oxidase subunidade 1 (COI) para a delimitação de espécies nesta região. A identificação morfológica de 163 flebotomíneos revelou a presença de 26 espécies distribuídas em 13 gêneros. Destes, Lutzomyia itambe, Deanemyia samueli, Pintomyia gruta, Psathyromyia barretti e Sciopemyia servulolimai ainda não haviam sido registrados no estado do Tocantins, assim, a fauna de flebotomíneos do estado é composta por 78 espécies. A primeira sequência de DNA de Edentomyia sp. foi gerada e provavelmente corresponde a uma espécie não descrita, sendo novos estudos necessários para verificar sua real identidade taxonômica. Além disso, oito espécies foram sequenciadas para o COI pela primeira vez, melhorando os repositórios de DNA para identificação molecular de espécies. O uso de códigos de barras de DNA se mostrou eficiente para identificar espécies de flebotomíneos no estado do Tocantins e revelou a existência de diversidade críptica para Nyssomyia whitmani e Psathyromyia aragaoi, que precisam de mais investigações usando uma abordagem de taxonomia integrativa. No entanto, as sequências de COI foram ineficazes na delimitação de espécies das séries Evandromyia (Aldamyia) e Psychodpygus série Chagasi, e nossa amostragem limitada deve ser avaliada em conjuntos de dados mais robustos para verificar a real utilidade das sequências de DNA na identificação de flebotomíneos. Diptera, Diptera (Diptera Psychodidae Phlebotominae vírus protozoários 1060 060 1.06 7 Cerrado Brasil estudo Palmas cavernas disso (COI região 16 2 gêneros Destes itambe samueli gruta assim sp descrita taxonômica vez aragaoi integrativa entanto Aldamyia (Aldamyia Chagasi 106 06 1.0 10 0 1.

Abstract Sand flies (Diptera, Psychodidae, Phlebotominae) are considered natural vectors of infectious agents, such as viruses, bacteria and protozoa. About 1,060 species are recognized, of which 73 have been recorded in the state of Tocantins, located in the transition of Amazon and Cerrado biomes, Northern Brazil. Here, we surveyed the sand fly fauna in different environments of the municipality of Palmas, including caves. Also, we evaluated a fragment of the cytochrome c oxidase subunit 1 (COI) as reliable for species delimitation in this region. The morphological identification of 163 sand flies revealed the presence of 26 species distributed in 13 genera. Of these, Lutzomyia itambe, Deanemyia samueli, Pintomyia gruta, Psathyromyia barretti, and Sciopemyia servulolimai had not yet been recorded in the state of Tocantins, thus, the sand fly fauna of the state is composed of 78 species. The first DNA sequence of Edentomyia sp., were generated, and probably correspond to an undescribed species, and new studies are needed to verify their real taxonomic identity. Also, eight nominal sand fly species were COI-sequenced for the first time, improving the DNA repositories for molecular species identification. The use of COI DNA barcodes proved to be efficient for identifying sand fly species in the state of Tocantins and revealed the existence of cryptic diversity for Nyssomyia whitmani and Psathyromyia aragaoi which need further investigations using an integrative taxonomy approach. However, COI sequences was ineffective in delimiting species of Evandromyia (Aldamyia) and Psychodpygus Chagasi series, and our limited sampling should be evaluated in more robust datasets to check the real usefulness of DNA sequences in identifying sand flies. Diptera, Diptera (Diptera Psychodidae Phlebotominae agents viruses protozoa 1060 060 1,06 recognized 7 biomes Brazil Here Palmas caves Also (COI region 16 2 genera these itambe samueli gruta barretti thus sp sp. generated identity COIsequenced sequenced time approach However Aldamyia (Aldamyia series 106 06 1,0 10 0 1,

https://doi.org/10.1590/1676-0611-bn-2024-1680

Phlebotominae (Diptera: Psychodomorpha: Psychodidae) deposited in the Museum of Zoology of the University of São Paulo Diptera (Diptera Psychodomorpha Psychodidae
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Conceição, Maurício dos Santos

; Alves, Veracilda Ribeiro

; Chaves Júnior, Salvador Paganella

; Shimabukuro, Paloma Helena Fernandes

; Galati, Eunice Aparecida Bianchi

; Andrade, Andrey José de

Papéis Avulsos de Zoologia

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2024, Volume 64 elocation e202464013

Abstract: En | Text: En | PDF: En

Abstract The subfamily Phlebotominae is represented by insects commonly known as sand flies widely distributed in tropical and subtropical regions, with the Neotropical region having the greatest diversity. Only New Zealand or the Pacific Islands, excepting New Caledonia, do not present records. One means of access to the more than 1,060 described species is through the specimens deposited in biological collections, and the availability of associated data on online platforms for consultation on the part of students and researchers. This being the case, this study aimed catalogue the sand flies deposited in the Invertebrate Collection of the MZUSP (University of São Paulo Museum of Zoology). Twenty-nine species designated as type material were found being of nine holotypes, one “allotype” and 90 paratypes described from five countries in the Americas: Panama, Honduras, Jamaica, Mexico, and Brazil. In addition to these, 1,346 non-type specimens, from 12 Brazilian states, are deposited in the collection and have been included here in list form. The MZUSP sand fly collection currently houses specimens from 152 species, which represents 28% (546) of the Phlebotominae fauna of the Americas. regions diversity Islands Caledonia records 1060 1 060 1,06 collections researchers case University Zoology. Zoology . Zoology) Twentynine Twenty holotypes allotype “allotype 9 Americas Panama Honduras Jamaica Mexico Brazil these 1346 346 1,34 nontype non states form 15 28 546 (546 106 06 1,0 134 34 1,3 2 54 (54 10 0 1, 13 3 5 (5 (

https://doi.org/10.11606/1807-0205/2024.64.013

The SISBIOTA-Diptera Brazilian Network: A long-term survey of Diptera from unexplored Brazilian Western Arc of Amazon, Cerrado, and Pantanal SISBIOTADiptera SISBIOTA Network longterm long term Amazon Cerrado
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Lamas, Carlos José Einicker

; Fachin, Diego Aguilar

; Falaschi, Rafaela Lopes

; Alcantara, Daniel Máximo Correa de

; Ale-Rocha, Rosaly

; Amorim, Dalton de Souza

; Araújo, Maíra Xavier

; Ascendino, Sharlene

; Baldassio, Letícia

; Bellodi, Carolina Ferraz

; Bravo, Freddy

; Calhau, Julia

; Capellari, Renato Soares

; Carmo-Neto, Antonio Marcelino do

; Cegolin, Bianca Melo

; Couri, Márcia Souto

; Carvalho, Claudio José Barros de

; Dios, Rodrigo de Vilhena Perez

; Falcon, Aida Vanessa Gomez

; Fusari, Livia Maria

; Garcia, Carolina de Almeida

; Gil-Azevedo, Leonardo Henrique

; Gomes, Marina Morim

; Graciolli, Gustavo

; Gudin, Filipe Macedo

; Henriques, Augusto Loureiro

; Krolow, Tiago Kütter

; Mendes, Luanna Layla

; Limeira-de-Oliveira, Francisco

; Maia, Valéria Cid

; Marinoni, Luciane

; Mello, Ramon Luciano

; Mello-Patiu, Cátia Antunes de

; Morales, Mírian Nunes

; Oliveira, Sarah Siqueira

; Patiu, Claudemir

; Proença, Barbara

; Pujol-Luz, Cristiane Vieira de Assis

; Pujol-Luz, José Roberto

; Rafael, José Albertino

; Riccardi, Paula Raile

; Rodrigues, João Paulo Vinicios

; Roque, Fabio de Oliveira

; Sallum, Maria Anice Mureb

; Santis, Marcelo Domingos de

; Santos, Charles Morphy Dias dos

; Santos, Josenilson Rodrigues dos

; Savaris, Marcoandre

; Shimabukuro, Paloma Helena Fernandes

; Silva, Vera Cristina

; Schelesky-Prado, Daniel de Castro

; Silva-Neto, Alberto Moreira da

; Camargo, Alexssandro

; Sousa, Viviane Rodrigues de

; Urso-Guimarães, Maria Virginia

; Wiedenbrug, Sofia

; Yamaguchi, Carolina

; Nihei, Silvio Shigueo

Revista Brasileira de Entomologia

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2023, Volume 67 N. 4 elocation e20230051

Abstract: En | Text: En | PDF: En

ABSTRACT The SISBIOTA-BRASIL was a three-year multimillion-dollar research program of the Brazilian government to document plants and animals in endangered/understudied areas and biomes in Brazil. Distributional patterns and the historical events that generated them are extensively unknown regarding Brazilian fauna and flora. This deficiency hinders the development of conservation policies and the understanding of evolutionary processes. Conservation decisions depend on precise knowledge of the taxonomy and geographic distribution of species. Given such a premise, we proposed to research the diversity of Diptera of the Brazilian western arc of Amazon, Cerrado, and Pantanal in the states of Mato Grosso, Mato Grosso do Sul, and Rondônia. Three important biomes of the South American continent characterize these Brazilian states: Amazon forest, Cerrado (Brazilian Savannah), and Pantanal. Besides their ecological relevance, these biomes historically lack intensive entomological surveys. Therefore, they are much underrepresented in the Brazilian natural history collections and in the scientific literature, which is further aggravated by the fact that these areas are being exponentially and rapidly converted to commercial lands. Our project involved over 90 collaborators from 24 different Brazilian institutions and one from Colombia among researchers, postdocs, graduate and undergraduate students, and technicians. We processed and analyzed nearly 300,000 specimens from ~60 families of Diptera collected with a large variety of methods in the sampled areas. Here, we provide a detailed overview of the genera and species diversity of 41 families treated. Our results point to a total of 2,130 species and 514 genera compiled and identified for the three states altogether, with an increase of 41% and 29% in the numbers of species and genera known for the three states combined, respectively. Overall, the 10 most species-rich families were Tachinidae, Cecidomyiidae, Tabanidae, Psychodidae, Sarcophagidae, Stratiomyidae, Bombyliidae, Syrphidae, Tephritidae, and Asilidae. The 10 most diverse in the number of genera were Tachinidae, Stratiomyidae, Asilidae, Mycetophilidae, Syrphidae, Tabanidae, Muscidae, Dolichopodidae, Sarcophagidae, and Chloropidae. So far, 111 scientific papers were published regarding taxonomic, phylogenetic, and biogeographical aspects of the studied families, with the description of 101 new species and three new genera. We expect that additional publications will result from this investigation because several specimens are now curated and being researched by specialists. SISBIOTABRASIL SISBIOTA BRASIL threeyear year multimilliondollar multimillion dollar endangeredunderstudied endangered understudied Brazil flora processes premise Sul Rondônia forest Savannah, Savannah , Savannah) relevance surveys Therefore literature lands 9 2 researchers postdocs students technicians 300000 300 000 300,00 60 ~6 Here 4 treated 2130 130 2,13 51 altogether 29 combined respectively Overall 1 speciesrich rich Tachinidae Cecidomyiidae Tabanidae Psychodidae Sarcophagidae Stratiomyidae Bombyliidae Syrphidae Tephritidae Asilidae Mycetophilidae Muscidae Dolichopodidae Chloropidae far 11 taxonomic phylogenetic specialists 30000 30 00 300,0 6 ~ 213 13 2,1 5 3000 3 0 300, 21 2,

https://doi.org/10.1590/1806-9665-rbent-2023-0051

[SciELO Preprints] - Occurrence records and metadata for sand flies (Diptera, Psychodidae, Phlebotominae) collected in the lands of indigenous people in the Brazilian Amazon
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Shimabukuro, Paloma Helena Fernandes Alves, Daniel Rocha Cangussu Barros, Jéssica Adalia Costa Nascimento, Luiz Otavio Cordeiro Baton, Luke Anthony Freire, Maíra Posteraro Silva, Manoel Edson Medeiros da Assis, Mauro Diego Gobira Guimarães de Morais, Sofia Ferreira Costa, Tiago Silva da Alves, Veracilda Ribeiro Moreno, Eduardo Stramandinoli

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Publication date: 2022-04-01

Abstract: En

In order to contribute to knowledge of the epidemiology of American cutaneous leishmaniasis (ACL) among indigenous people living in sylvatic regions, we studied the sand fly fauna collected in areas of disease transmission in the Brazilian Amazon. Our two datasets reported here are comprised of occurrence data for sand flies from the Suruwaha Indigenous Land in the state of Amazonas collected between 2012-1013, and the Wajãpi Indigenous Land in the state of Amapá collected between 2013-2014. Sand flies were collected using unbaited CDC-like light traps at various sites within each study area and were identified to species-level by taxonomists with expertise in Amazonian fauna. A total of 4,646 records are reported: 1,428 from the Suruwaha and 3,218 from the Wajãpi. These records will contribute to a better understanding of ACL transmission dynamics, as well as the distribution of insect vectors, in these areas.

https://doi.org/10.1590/SciELOPreprints.3879

[SciELO Preprints] - Sand fly (Diptera Psychodidae Phlebotominae) records in Acre, Brazil a Dataset
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Godoy, Rodrigo Espindola Andrade, Andrey José de Shimabukuro, Paloma Helena Fernandes Brilhante, Andreia Fernandes

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Publication date: 2022-03-18

Abstract: En

Amazonian phlebotomine fauna is considered one of the most diverse in the world. In addition, the region is the most prevalent for leishmaniasis in Brazil and South America. The state of Acre, which belongs to this region, also stands out in terms of the diversity of the sand fly fauna, as well as the occurrence of American tegumentary leishmaniasis. In this context, the present Dataset comprise a bibliographic review of sand fly species recorded in Acre State, Amazon region, Brazil. A total of 1,096 observations from Material Citation type (and two of preserved specimens) were presented using 32 variables according to Darwin Core terms. The bibliographic review was performed in PubMed, Google Scholar, SciELO, BVS (Biblioteca Virtual em Saúde) and bibliographic references cited in related scientific articles. Thus, the present study is a solid report for further studies on sand fly studies in Acre and other Amazon states.

https://doi.org/10.1590/SciELOPreprints.3792

[SciELO Preprints] - Online catalogue of the Coleção de Flebotomíneos (FIOCRUZ/COLFLEB), a biological collection of American sand flies (Diptera: Psychodidae, Phlebotominae) held at Fiocruz Minas, Brazil
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Andrade-Filho, José Dilermando Reis, Alanna Silva Monteiro, Carolina Cunha Shimabukuro, Paloma Helena Fernandes

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Publication date: 2022-03-16

Abstract: En Pt

The “Coleção de Flebotomíneos” (FIOCRUZ/COLFLEB) held at Fiocruz Minas is a curated biological collection comprised of approximately 80,000 individual specimens of 370 species of sand flies (Diptera: Psychodidae, Phlebotominae) mostly from the Americas collected over the last 80 years by entomologists interested in understanding and controlling the vector-borne disease leishmaniases. Since 2010, the metadata of each of the individual biological specimens held in FIOCRUZ/COLFLEB, including the back catalogue of those deposited in previous decades, has been digitized. Here, our resulting electronic catalogue, containing records for 72,624 of the specimens, including all of the available provenance information associated with each of them, is published online through the speciesLink network lt;http://www.splink.org.br/search?collectioncode=FIOCRUZ11COLFLEBamp;group=animaisamp;lang=ptamp;action=openformgt; and the Sistema de Informação sobre a Biodiversidade Brasileira (SiBBr) lt;http://ipt.fiocruz.br/ipt/resource?r=fiocruz_colflebgt;.

https://doi.org/10.1590/SciELOPreprints.3782

Evidence of a sylvatic enzootic cycle of Leishmania infantum in the State of Amapá, Brazil
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Moreno, Eduardo Stramandinoli

; Sabioni, Luiz Alberto

; Seixas, Marina Maria Moraes de

; Souza Filho, Job Alves de

; Marcelino, Andreza Pain

; Shimabukuro, Paloma Helena Fernandes

Revista da Sociedade Brasileira de Medicina Tropical

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2020, Volume 53 elocation e20190169

Abstract: En | Text: En | PDF: En

Abstract INTRODUCTION: Leishmania infantum was considered to be absent from Amapá until 2017 when canine infection was detected. However, there is a lack of knowledge about which reservoir species are involved in transmission in this region. METHODS: Between 2014 and 2016, 86 samples from wild mammals and 74 from domestic dogs were collected in Wajãpi Indigenous Territory and were tested for the presence of deoxyribonucleic acid (DNA) of Leishmania. RESULTS: The DNA of Le. infantum was detected in two rodent samples, Dasyprocta sp. and Proechimys cuvieri. CONCLUSIONS: This is the first evidence characterizing a sylvatic transmission cycle of Le. infantum in the State of Amapá.

https://doi.org/10.1590/0037-8682-0169-2019 902 downloads

Phlebotomine sandflies (Diptera: Psychodidae) from Lábrea, state of Amazonas, Brazil, with a description of Evandromyia (Aldamyia) apurinan Shimabukuro, Figueira & Silva, sp. nov.
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Figueira, Elder Augusto Guimaraes

; Silva, Glacicleide

; Chagas, Erica Cristina da Silva

; Shimabukuro, Paloma Helena Fernandes

Memórias do Instituto Oswaldo Cruz

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may 2013, Volume 108 N. 3 Pages 280 - 287

Abstract: En | Text: En | PDF: En

An entomological survey was conducted from July-December 2009 and September-December 2010, as part of the epidemiological monitoring of American cutaneous leishmaniasis (ACL) in the municipality of Lábrea, state of Amazonas (AM), Brazil. Sandflies were collected using CDC light traps installed in intra and peridomiciliary locations, as well as the border of forested areas around houses where autochthonous cases of ACL were recorded. A total of 510 sandflies belonging to 26 species were collected. The most abundant species was Nyssomyia antunesi (44.5%) followed by Evandromyia walkeri (10.6%) and Micropygomyia rorotaensis (9.8%). Here we also describe Evandromyia (Aldamyia) apurinan sp. nov. and report new records for Trichophoromyia flochi and Evandromyia sipani in AM and Brazil, respectively. Our results describe the composition of the sandfly fauna in the south of AM and suggest Ny. antunesi as the putative vector in the transmission of Leishmania in this area of the Amazon Region.

https://doi.org/10.1590/S0074-02762013000300004 2164 downloads

16S rRNA gene-based identification of microbiota associated with the parthenogenetic troglobiont sand fly Deanemyia maruaga (Diptera, Psychodidae) from central Amazon, Brazil
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Sousa, Katianne Barbosa Alves de

; Silva, Túllio Romão Ribeiro da

; Alencar, Ronildo Baiatone

; Baton, Luke Anthony

; Naveca, Felipe Gomes

; Shimabukuro, Paloma Helena Fernandes

Brazilian Journal of Microbiology

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2013, Volume 44 N. 1 Pages 325 - 328

Abstract: En | Text: En | PDF: En

Bacteria associated with the parthenogenetic troglobiont sand fly Deanemyia maruaga were characterized by sequencing cloned 16S rDNA PCR products. Eleven novel partial 16S rDNA sequences, with varying degrees of similarity to Actinobacteria, were identified. None of the sequences identified had homology to those known from parthenogenesis-inducing bacteria.

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Lista de espécies de Phlebotominae (Diptera, Psychodidae) do Estado de São Paulo, Brasil, com comentários sobre sua distribuição geográfica
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Shimabukuro, Paloma Helena Fernandes

; Galati, Eunice Aparecida Bianchi

Biota Neotropica

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dec 2011, Volume 11 Suppl. 1 Pages 685 - 704

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

Os flebotomíneos são insetos de interesse médico, responsáveis pela transmissão de protozoários parasitas do gênero Leishmania entre animais reservatórios humanos e não-humanos, os quais são encontrados em todo o Estado de São Paulo, Brasil. As 69 espécies de flebotomíneos registradas no Estado de São Paulo, incluindo 7 espécies registradas aqui pela primeira vez, estão organizadas em uma lista de espécies utilizando a classificação filogenética de Galati (2003). Nossa lista de espécies incorpora e atualiza os dados publicados por Barretto (1947) e Martins et al. (1978), e inclui registros para mais 33 espécies retirados da literatura publicada desde então, e também da observação de espécimes depositados em coleções entomológicas. Para cada espécie de flebotomíneo, a distribuição geográfica por município é fornecida, com comentários sobre a distribuição de seis vetores de leishmaniose cutânea, bem como de Lutzomyia longipalpis, o principal vetor de leishmaniose visceral.

Phlebotomine sand flies are medically important insects, responsible for the transmission of Leishmania parasites between humans and non-human animal reservoirs, which are found throughout São Paulo State, Brazil. The 69 recorded species of phlebotomine sand flies from São Paulo State, including 7 species reported here for the first time to occur in this region, are organized in a checklist using the phylogenetic classification of Galati (2003). Our checklist incorporates and updates those previously published by Barretto (1947) and Martins et al. (1978), and includes records for 33 additional phlebotomine species taken from the literature published since and our examination of specimens held in entomological museum collections. For each sand fly species, the geographical distribution by municipality is also given, together with comments on the distribution of the six vectors of cutaneous leishmaniasis, as well as Lutzomyia longipalpis, the main vector of visceral leishmaniasis.

5943 downloads

11.

Chave de identificação ilustrada dos Phlebotominae (Diptera, Psychodidae) do estado de São Paulo, Brasil
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Shimabukuro, Paloma Helena Fernandes

; Tolezano, José Eduardo

; Galati, Eunice Aparecida Bianchi

Papéis Avulsos de Zoologia

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2011, Volume 51 N. 27 Pages 399 - 441

Abstract: Pt En | Text: Pt En | PDF: Pt | PDF: En

Flebotomíneos são insetos de importância médica, responsáveis pela transmissão de parasitas do gênero Leishmania entre humanos e animais não humanos, os quais são encontrados no estado de São Paulo, Brasil. A correta identificação das espécies envolvidas na transmissão de doenças é fundamental para elaboração de estratégias para o controle desses vetores. Para produzir uma chave ilustrada para as 67 espécies de machos e 57 espécies de fêmeas de flebotomíneos registradas no estado de São Paulo, examinamos e ilustramos espécimes montados em lâminas de microscopia obtidos de coleções entomológicas.

Phlebotomine sand flies are medically important insects, responsible for the transmission of Leishmania parasites between humans and non-human animals, which are found throughout São Paulo state, Brazil. The correct identification of species implicated in the transmission of diseases is paramount to elaborate strategies for vector control. In order to produce an illustrated key to the 67 sand flies male species and 57 female species recorded in São Paulo state we examined and illustrated specimens mounted in microscope slides from entomological collections.

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Index code	Element
ti	article title
au	author
kw	article keywords
subject	subject (title words, abstract and keywords)
ab	abstract
ta	journal short title (e.g. Cad. Saúde Pública)
journal_title	journal full title (e.g. Cadernos de Saúde Pública)
la	publication language code (e.g. pt - Portuguese, es - Spanish)
type	document type
pid	publication identifier
publication_year	publication year of publication
sponsor	sponsor
aff_country	country code of the author's affiliation
aff_institution	author affiliation institution
volume	article volume
issue	article issue
elocation	elocation
doi	DOI number
issn	journal ISSN
in	SciELO colection code (e.g. scl - Brasil, col - Colômbia)
use_license	article usage license code

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