ABSTRACT Arbuscular mycorrhizal (AM) fungi can enhance plant resistance particularly against soil-borne pathogenic fungi. However, little is known about the effects of Funneliformis mosseae on the community composition of rhizosphere fungi in soybean (Glycine max [L.] Merr.) continuous cropping soil. Here, the disease index of soybean root rot was analyzed, and high throughput sequencing technology was applied to investigate whether F. mosseae could change the composition of fungal communities in the rhizosphere of continuous cropping soybean during seedling period. The results indicated that the disease index of soybean root rot decreased significantly after inoculation of F. mosseae. The root rot disease index was also affected by the increasing of continuous cropping regimes. Furthermore, the relative abundance of fungal community in soybean rhizosphere soil and root samples was influenced after inoculation. Ascomycota was the dominant phylum in most samples. Basidiomycota was the second dominant phylum in all the soil samples, but Olpidiomycota was the second phylum in most root samples. At the genus level, both inoculation and continuous cropping regimes had significant effects on the dominant genus and their relative abundances in all the samples. The relative abundance of some plant pathogenic fungi such as Fusarium in the inoculated root samples was lower than those in the non-inoculated root samples in the same continuous cropping regime. The results can provide new insights into the interactive effects of AM fungi and rhizosphere fungi, and also provide theoretical evidence on biological solutions to alleviate the obstacles of soybean continuous cropping

ABSTRACT Soybean root rot is a major disease of soybean (Glycine max [L.] Merr.) under continuous cropping, which leads to dramatic variations in the rhizosphere microflora. Soybean was sown in a different field after year zero, and continuous cropping was applied for 1 or 2 yr. The objectives were to investigate the variation in fungal populations present or inhabiting soybean roots during 3 yr of monocropping using next-generation sequencing to compare the three sets of root samples and provide a theoretical basis for the following inoculation study of the different pathogens involved in root rot disease in soybean, variation in fungal populations, and incidence of root rot. Results showed that operational taxonomic units (OTUs) of the three samples were divided into 19 phyla, 169 families, and 235 genera. Ascomycota and Basidiomycota were the dominant phyla in the continuous cropping root samples. Continuous cropping could increase the relative abundance of some fungi, namely Fusarium, Rhizoctonia, and Thelebolus, which are associated with soybean root rot for 2 and 3 yr of cropping. Continuous cropping could also increase the abundance of Gymnoascus, Chrysosporium, Ctenomyces, Aphanoascus, and Aspergillus, which are soil pathogenic fungi that can cause other plant diseases

Abstract Arbuscular mycorrhizae (AM) fungi play a crucial role in the growth of soybean; however, the planting system employed is thought to have an effect on AM fungal communities in the rhizosphere. This study was performed to explore the influence of continuous soybean cropping on the diversity of Arbuscular mycorrhizal (AM) fungi, and to identify the dominant AM fungus during the seedling stage. Three soybean cultivars were planted under two and three years continuous cropping, respectively. The diversity of AM fungi in the rhizosphere soil at the seedling stage was subsequently analyzed using polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE). The results showed that an increase in cropping years improved the colonization rate of AM in all three soybean cultivars. Moreover, the dominant species were found to be Funneliformis mosseae and Glomus species. The results of cluster analysis further confirmed that the number of years of continuous cropping significantly affected the composition of rhizospheric AM fungal communities in different soybean cultivars.

Soybean (Glycine max [L.] Merr.) root rot is an important disease of soybean under continuous cropping, and root rot is widely distributed throughout the world. This disease is extremely harmful, and it is difficult to prevent and control. The study aimed to elucidate the composition of root rot pathogenic fungal communities in the continuous cropping of soybean. In this study, we employed PCR- DGGE technology to analyze the communities of root rot pathogenic fungi in soybean rhizosphere soil subjected to continuous cropping during a season with a high incidence of root rot in Heilongjiang province, China, the main soybean producing area in China. The results of 13 DGGE bands were analyzed by phylogenetic revealed that the predominant root rot pathogenic fungi in rhizosphere soil in the test area were Pythium ultimum and Fusarium species. The results of cluster analysis showed that the duration of continuous cropping, the soybean variety and the plant growth stage all had significant effects on the diversity of root rot pathogenic fungi in rhizosphere soil.