Abstract Scientometrics enables us to comprehend the interests and trends in scientific knowledge production and dissemination. In this study, we evaluate the effects of gender, academic experience, location of residence, and graduate program score on the quantity of published articles, the number of citations and the H-index of researchers belonging to Brazilian graduate programs in Biodiversity. Variables related to the researchers were measured, and the relevance in explaining scientific production was examined using hierarchical models. In graduate programs, there were more men than females. The number of articles as first author and the H-index increase progressively through the researchers’ career, while the number of citations increases at the beginning of their careers, stabilizing between 10 and 20 years, and increasing again after 30 years of career. We concluded that gender, academic experience, and graduate program score were the most important variables in explaining the scientific production of graduate programs in Biodiversity in Brazil.